Open search Plant PTM Viewer 2.0 - N-glycosylation
N-glycosylation in Arabidopsis thaliana
29 modifications in 29 peptides, found in 47 proteins
Experiment Details
Exp 164a
| Experimental Setup | |
| Tissue | Tissue atlas (Mergner et al., 2020) |
|---|---|
| Condition | Control conditions |
| MS Instrument | Q Exactive HF |
| MS/MS Search Parameters | |
| Protein Database | Arabidopsis thaliana |
| Decoy Strategy | Target-decoy |
| FDR Threshold | 0.01 |
| Search Algorithm(s) | MSFragger version 3.3 |
| Precursor Mass Tolerance | Open search [-150; 500 Da] |
| Protease | Trypsin |
| Fixed Modifications | Carbamidomethylation (C) |
| Variable Modifications | Oxidation (M) |
| Other Information | |
| Comments | Mass shift of 203.079 ± 0.002 Da localized to Asn, all within the canonical N-X-S/T motif and with spectra containing oxonium ions. |