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SnRK1-triggered switch of bZIP63 dimerization

Phosphorylation in Arabidopsis thaliana

15 modifications in 13 peptides, found in 11 proteins

Experiment Details

Exp 95


Experimental Setup
TissueLeaf bZIP63 OE
ConditionControl
PTM EnrichmentHAMMOC
MS InstrumentLTQ Orbitrap Velos
MS/MS Search Parameters
Protein DatabaseNCBI Arabidopsis non-redundant database
Decoy StrategyReverse decoy database
FDR Threshold0.01
Search Algorithm(s)MASCOT version 2.2.04, SEQUEST
Precursor Mass Tolerance3 ppm
Identification ScoreXCorr
ProteaseTrypsin
Fixed ModificationsCarbamidomethyl (C)
Variable ModificationsOxidation (M)
Phosphorylation (STY)
Other Information
CommentsPhosphat 4.0 - Defined sites (pS/T/Y).


Publication Information

Mair et al., 2015

PubMed ID: 26263501

No external accession available

Abstract

Elife. 2015 Aug 11;4:e05828. doi: 10.7554/eLife.05828.

SnRK1-triggered switch of bZIP63 dimerization mediates the low-energy response 
in plants.

Mair A(1), Pedrotti L(2), Wurzinger B(1), Anrather D(3), Simeunovic A(1), Weiste 
C(2), Valerio C(4), Dietrich K(2), Kirchler T(5), Nägele T(1), Vicente Carbajosa 
J(6), Hanson J(7), Baena-González E(4), Chaban C(5), Weckwerth W(1), Dröge-Laser 
W(2), Teige M(1).

Author information:
(1)Department of Ecogenomics and Systems Biology, University of Vienna, Vienna, 
Austria.
(2)Pharmaceutical Biology, Julius-von-Sachs-Institute, University of Würzburg, 
Würzburg, Germany.
(3)Mass Spectrometry Facility, Max F. Perutz Laboratories, University of Vienna, 
Vienna, Austria.
(4)Instituto Gulbenkian de Ciência, Oeiras, Portugal.
(5)Department of Plant Physiology, Center for Plant Molecular Biology, 
University of Tübingen, Tübingen, Germany.
(6)Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de 
Madrid, Madrid, Spain.
(7)Department of Molecular Plant Physiology, Utrecht University, Utrecht, 
Netherlands.

Metabolic adjustment to changing environmental conditions, particularly 
balancing of growth and defense responses, is crucial for all organisms to 
survive. The evolutionary conserved AMPK/Snf1/SnRK1 kinases are well-known 
metabolic master regulators in the low-energy response in animals, yeast and 
plants. They act at two different levels: by modulating the activity of key 
metabolic enzymes, and by massive transcriptional reprogramming. While the first 
part is well established, the latter function is only partially understood in 
animals and not at all in plants. Here we identified the Arabidopsis 
transcription factor bZIP63 as key regulator of the starvation response and 
direct target of the SnRK1 kinase. Phosphorylation of bZIP63 by SnRK1 changed 
its dimerization preference, thereby affecting target gene expression and 
ultimately primary metabolism. A bzip63 knock-out mutant exhibited 
starvation-related phenotypes, which could be functionally complemented by wild 
type bZIP63, but not by a version harboring point mutations in the identified 
SnRK1 target sites.

DOI: 10.7554/eLife.05828
PMCID: PMC4558565
PMID: 26263501 [Indexed for MEDLINE]

Conflict of interest statement: The authors declare that no competing interests 
exist.