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OxiTRAQ SA and flg22 responses - flg22 vs mock

Reversible Cysteine Oxidation in Arabidopsis thaliana

130 modifications in 116 peptides, found in 221 proteins

Experiment Details

Exp 91b


Experimental Setup
TissueCell culture, T87
Condition 15 min 10 µM flg22
PTM EnrichmentOxiTRAQ
MS InstrumentLTQ Orbitrap Velos
MS/MS Search Parameters
Protein Database TAIR10 + contaminants
Decoy StrategyReverse decoy database
FDR Threshold0.01
Search Algorithm(s)MASCOT version 2.3
Precursor Mass Tolerance10 ppm
Identification ScoreMASCOT Score
ProteaseTrypsin
Variable ModificationsN-ethylmalmeide (C)
Oxidation (M)
Carbamidomethyl (C)
LabelsiTRAQ (K)
iTRAQ (Peptide N-term)
iTRAQ (Y)
Other Information
CommentsSupplemental Table S2 with Scores from Supplemental Table S1.


Publication Information

Liu et al., 2015

PubMed ID: 25720653

ProteomeXchange: PXD001349

Abstract

Sci Rep. 2015 Feb 27;5:8625. doi: 10.1038/srep08625.

Proteomic identification of early salicylate- and flg22-responsive 
redox-sensitive proteins in Arabidopsis.

Liu P(1), Zhang H(2), Yu B(3), Xiong L(4), Xia Y(5).

Author information:
(1)1] Department of Biology, Hong Kong Baptist University, Kowloon, Hong Kong 
[2] Biological and Environmental Sciences and Engineering Division, King 
Abdullah University of Science and Technology, Thuwal, Saudi Arabia.
(2)Biosciences Core Laboratory, King Abdullah University of Science and 
Technology, Thuwal, Saudi Arabia.
(3)Department of Biology, Hong Kong Baptist University, Kowloon, Hong Kong.
(4)Biological and Environmental Sciences and Engineering Division, King Abdullah 
University of Science and Technology, Thuwal, Saudi Arabia.
(5)1] Department of Biology, Hong Kong Baptist University, Kowloon, Hong Kong 
[2] Partner State Key Laboratory of Agrobiotechnology, Chinese University of 
Hong Kong, Shatin, Hong Kong.

Accumulation of reactive oxygen species (ROS) is one of the early defense 
responses against pathogen infection in plants. The mechanism about the initial 
and direct regulation of the defense signaling pathway by ROS remains elusive. 
Perturbation of cellular redox homeostasis by ROS is believed to alter functions 
of redox-sensitive proteins through their oxidative modifications. Here we 
report an OxiTRAQ-based proteomic study in identifying proteins whose cysteines 
underwent oxidative modifications in Arabidopsis cells during the early response 
to salicylate or flg22, two defense pathway elicitors that are known to disturb 
cellular redox homeostasis. Among the salicylate- and/or flg22-responsive 
redox-sensitive proteins are those involved in transcriptional regulation, 
chromatin remodeling, RNA processing, post-translational modifications, and 
nucleocytoplasmic shuttling. The identification of the 
salicylate-/flg22-responsive redox-sensitive proteins provides a foundation from 
which further study can be conducted toward understanding biological 
significance of their oxidative modifications during the plant defense response.

DOI: 10.1038/srep08625
PMCID: PMC4342551
PMID: 25720653 [Indexed for MEDLINE]