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ABA-induced protein phosphorylation

Phosphorylation in Arabidopsis thaliana

58 modifications in 54 peptides, found in 126 proteins

Experiment Details

Exp 35


Experimental Setup
TissueSeedlings
Condition5/15/30 min 50 µM ABA
PTM EnrichmentTiO2
MS InstrumentLTQ
MS/MS Search Parameters
Protein DatabaseTAIR9
Decoy StrategyReverse decoy database
FDR Threshold0.01
Search Algorithm(s)MASCOT version 2.2
Precursor Mass Tolerance30 ppm
ProteaseTrypsin
Fixed ModificationsCarbamidomethyl (C)
Variable ModificationsOxidation (M)
Phosphorylation (STY)
Other Information
Comments Phosphat 4.0 - Defined sites (pS/T/Y)


Publication Information

Kline et al., 2010

PubMed ID: 20733066

No external accession available

Abstract

Proc Natl Acad Sci U S A. 2010 Sep 7;107(36):15986-91. doi: 
10.1073/pnas.1007879107. Epub 2010 Aug 23.

In planta changes in protein phosphorylation induced by the plant hormone 
abscisic acid.

Kline KG(1), Barrett-Wilt GA, Sussman MR.

Author information:
(1)Biotechnology Center, Department of Biochemistry, University of Wisconsin, 
Madison, 53706, USA.

Abscisic acid (ABA) is a hormone that controls seed dormancy and germination as 
well as the overall plant response to important environmental stresses such as 
drought. Recent studies have demonstrated that the ABA-bound receptor binds to 
and inhibits a class of protein phosphatases. To identify more broadly the 
phosphoproteins affected by this hormone in vivo, we used (14)N/(15)N metabolic 
labeling to perform a quantitative untargeted mass spectrometric analysis of the 
Arabidopsis thaliana phosphoproteome following ABA treatment. We found that 50 
different phosphopeptides had their phosphorylation state significantly altered 
by ABA over a treatment period lasting 5-30 min. Among these changes were 
increases in phosphorylation of subfamily 2 SNF1-related kinases and 
ABA-responsive basic leucine zipper transcription factors implicated in ABA 
signaling by previous in vitro studies. Furthermore, four members of the 
aquaporin family showed decreased phosphorylation at a carboxy-terminal serine 
which is predicted to cause closure of the water-transporting aquaporin gate, 
consistent with ABA's role in ameliorating the effect of drought. Finally, more 
than 20 proteins not previously known to be involved with ABA were found to have 
significantly altered phosphorylation levels. Many of these changes are 
phosphorylation decreases, indicating that an expanded model of ABA signaling, 
beyond simple phosphatase inhibition, may be necessary. This quantitative 
proteomics dataset provides a more comprehensive, albeit incomplete, view both 
of the protein targets whose biochemical activities are likely to be controlled 
by ABA and of the nature of the emerging phosphorylation and dephosphorylation 
cascades triggered by this hormone.

DOI: 10.1073/pnas.1007879107
PMCID: PMC2936636
PMID: 20733066 [Indexed for MEDLINE]

Conflict of interest statement: The authors declare no conflict of interest.