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Immuno-dot blot phosphorylation

Phosphorylation in Arabidopsis thaliana

28 modifications in 27 peptides, found in 93 proteins

Experiment Details

Exp 31


Experimental Setup
TissueControl
ConditionAmbient air or 12h 10 ppm ethylene
PTM EnrichmentTiO2
MS InstrumentLTQ
MS/MS Search Parameters
Protein DatabaseTAIR7
FDR ThresholdManual validation of MASCOT Score > 35
Search Algorithm(s)MASCOT
Identification ScoreMASCOT Score
ProteaseTrypsin
Fixed ModificationsCarbamidomethyl (C)
Variable ModificationsOxidation (M)
Phosphorylation (STY)
Other Information
Comments Phosphat 4.0 - Defined sites (pS/T/Y)


Publication Information

Wang et al., 2009

PubMed ID: 19341826

No external accession available

Abstract

J Proteomics. 2009 Jul 21;72(5):831-5. doi: 10.1016/j.jprot.2009.03.006. Epub 
2009 Mar 31.

A simple and effective method for detecting phosphopeptides for phosphoproteomic 
analysis.

Wang Z(1), Dong G, Singh S, Steen H, Li J.

Author information:
(1)Department of Biochemistry and Molecular Biology, Mississippi State 
University, Mississippi State, MS, USA.

An immuno-dot blot method for detecting phosphopeptides is described. This 
method allows detection of phosphopeptides prior to analysis by mass 
spectrometry, and does not require specialized equipment. Further, this method 
allows peptides containing a given phosphoamino acid to be selectively detected 
by using phosphoamino acid-specific antibody. This phosphopeptide assay should 
be useful for researchers who do not have direct access to the mass 
spectrometers to prepare high quality samples by optimizing phosphopeptide 
enrichment procedures prior to mass spectrometry analysis.

DOI: 10.1016/j.jprot.2009.03.006
PMID: 19341826 [Indexed for MEDLINE]