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Sucrose-induced phosphorylation

Phosphorylation in Arabidopsis thaliana

65 modifications in 61 peptides, found in 189 proteins

Experiment Details

Exp 24


Experimental Setup
Tissue7d Seedling
ConditionSucrose starvation + 24h dark, followed by sucrose resupply
PTM EnrichmentIMAC
MS InstrumentLTQ
MS/MS Search Parameters
Protein DatabaseTAIR6
Decoy StrategyReverse decoy database
FDR ThresholdFDR 1.12%
Search Algorithm(s)MASCOT version 2.1
Precursor Mass Tolerance300 ppm
ProteaseTrypsin
Fixed ModificationsCarbamidomethyl (C)
Variable ModificationsOxidation (M)
Phosphorylation (STY)
Other Information
Comments Phosphat 4.0 - Defined sites (pS/T/Y)


Publication Information

Niittylä et al., 2007

PubMed ID: 17586839

No external accession available

Abstract

Mol Cell Proteomics. 2007 Oct;6(10):1711-26. doi: 10.1074/mcp.M700164-MCP200. 
Epub 2007 Jun 23.

Temporal analysis of sucrose-induced phosphorylation changes in plasma membrane 
proteins of Arabidopsis.

Niittylä T(1), Fuglsang AT, Palmgren MG, Frommer WB, Schulze WX.

Author information:
(1)Max Planck Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476 
Golm, Germany.

Sucrose is the main product of photosynthesis and the most common transport form 
of carbon in plants. In addition, sucrose is a compound that serves as a signal 
affecting metabolic flux and development. Here we provide first results of 
externally induced phosphorylation changes of plasma membrane proteins in 
Arabidopsis. In an unbiased approach, seedlings were grown in liquid medium with 
sucrose and then depleted of carbon before sucrose was resupplied. Plasma 
membranes were purified, and phosphopeptides were enriched and subsequently 
analyzed quantitatively by mass spectrometry. In total, 67 phosphopeptides were 
identified, most of which were quantified over five time points of sucrose 
resupply. Among the identified phosphorylation sites, the well described 
phosphorylation site at the C terminus of plasma membrane H(+)-ATPases showed a 
relative increase in phosphorylation level in response to sucrose. This 
corresponded to a significant increase of proton pumping activity of plasma 
membrane vesicles from sucrose-supplied seedlings. A new phosphorylation site 
was identified in the plasma membrane H(+)-ATPase AHA1 and/or AHA2. This 
phosphorylation site was shown to be crucial for ATPase activity and overrode 
regulation via the well known C-terminal phosphorylation site. Novel 
phosphorylation sites were identified for both receptor kinases and cytosolic 
kinases that showed rapid increases in relative intensities after short times of 
sucrose treatment. Seven response classes were identified including 
non-responsive, rapid increase (within 3 min), slow increase, and rapid 
decrease. Relative quantification of phosphorylation changes by 
phosphoproteomics provides a means for identification of fast responses to 
external stimuli in plants as a basis for further functional characterization.

DOI: 10.1074/mcp.M700164-MCP200
PMID: 17586839 [Indexed for MEDLINE]