Publications

2297. Polyploidy

Yves Van de Peer

(2023) - Springer US

DOI
2296. Cataloguing Protein Complexes In Planta Using TurboID-Catalyzed Proximity Labeling

Lore Gryffroy, Joren De Ryck, Veronique Jonckheere, Sofie Goormachtig, Alain Goossens, Petra Van Damme

(2023) - Methods in Molecular Biology

DOI
2295. Hormonal control of the molecular networks guiding vascular tissue development in the primary root meristem of Arabidopsis

Yanbiao Sun, Yang Baojun, Bert De Rybel

(2023) - Journal of Experimental Botany

DOI
2294. The long non‐coding RNALINDA restrains cellular collapse following DNA damage in Arabidopsis thaliana

Josephine Herbst, Solveig Henriette Nagy, Ilse Vercauteren, Lieven De Veylder, Reinhard Kunze

(2023) - The Plant Journal

DOI
2293. Continual improvement of multiplex mutagenesis in Arabidopsis

Ward Develtere, Ward Decaestecker, Debbie Rombaut, Chantal Anders, Elke Clicque, Marnik Vuylsteke, Thomas B. Jacobs

(2023) -

DOI
2292. Assessing the quality of comparative genomics data and results with the cogeqc R/Bioconductor package

Fabricio Almeida‐Silva, Yves Van de Peer

(2023) - Methods in Ecology and Evolution

DOI
2291. Pigmentation enhancement techniques during ornamental fish production

Cher Chien Lau, Siti Azizah Mohd Nor, Min Pau Tan, Yik Sung Yeong, Li Lian Wong, Yves Van de Peer, Patrick Sorgeloos, Muhd Danish-Daniel

(2023) - Reviews in Fish Biology and Fisheries

DOI
2290. Chemical induction of hypocotyl rooting reveals extensive conservation of auxin signalling controlling lateral and adventitious root formation

Yinwei Zeng, Inge Verstraeten, HoangKhai Trinh, Robin Lardon, Sébastien Schotte, Damilola Olatunji, Thomas Heugebaert, Christian V. Stevens, Mussa Quareshy, Richard Napier, SARA PAOLA NASTASI, Alex Costa, Bert De Rybel, Catherine Bellini, Tom Beeckman, Steffen Vanneste, Danny Geelen

(2023) - New Phytologist

DOI
2289. GH3‐mediated auxin inactivation attenuates multiple stages of lateral root development

Qing Wang, Hugues De Gernier, Xingliang Duan, Yuanming Xie, Danny Geelen, Ken‐ishiro Hayashi, Wei Xuan, Markus Geisler, Kirsten ten Tusscher, Tom Beeckman, Steffen Vanneste

(2023) - New Phytologist

DOI
2288. Cella: 3D data visualization for plant single-cell transcriptomics in Blender.

Su C, Lyu M, Mähönen AP, Helariutta Y, De Rybel B, Muranen S

(2023) - Physiologia plantarum

DOI
2287. Microparticle-mediated CRISPR DNA delivery for genome editing in poplar

Lennart Hoengenaert, Jan Van Doorsselaere, Ruben Vanholme, Wout Boerjan

(2023) - Frontiers in Plant Science

DOI
2286. Expression divergence of expansin genes drive the heteroblasty in Ceratopteris chingii.

Zhang Y, Van de Peer Y, Lu B, Zhang S, Che J, Chen J, Marchal K, Yang X

(2023) - BMC biology

DOI
2285. Microparticle-mediated CRISPR DNA delivery for genome editing in poplar.

Hoengenaert L, Van Doorsselaere J, Vanholme R, Boerjan W

(2023) - Frontiers in plant science

DOI
2284. Monitoring of drought stress and transpiration rate using proximal thermal and hyperspectral imaging in an indoor automated plant phenotyping platform

Stien Mertens, Lennart Verbraeken, Heike Sprenger, Sam De Meyer, Kirin Demuynck, Bernard Cannoot, Julie Merchie, Jolien De Block, Jonathan T. Vogel, Wesley Bruce, Hilde Nelissen, Steven Maere, Dirk Inzé, Nathalie Wuyts

(2023) - Plant Methods

DOI
2283. Interspecies co‐expression analysis of lateral root development using inducible systems in rice, Medicago, and Arabidopsis

Hans Motte, Boris Parizot, Wei Xuan, Qian Chen, Steven Maere, Sandra Bensmihen, Tom Beeckman

(2023) - The Plant Journal

DOI
2282. Phosphoproteome analyses pinpoint the F-box protein SLOW MOTION as a regulator of warm temperature-mediated hypocotyl growth in Arabidopsis.

Zhu S, Pan L, Vu LD, Xu X, Orosa-Puente B, Zhu T, Neyt P, van de Cotte B, Jacobs TB, Gendron JM, Spoel SH, Gevaert K, De Smet I

(2023) - The New phytologist

DOI
2281. Paternally imprinted LATE-FLOWERING2 transcription factor contributes to paternal-excess interploidy hybridization barriers in wheat.

Yang G, Feng M, Yu K, Cui G, Zhou Y, Sun L, Gao L, Zhang Y, Peng H, Yao Y, Hu Z, Rossi V, De Smet I, Ni Z, Sun Q, Xin M

(2023) - Journal of integrative plant biology

DOI
2280. Editorial: Proteomics of plant development and hormonal responses, volume II.

Jones AME, De Smet I

(2023) - Frontiers in plant science

DOI
2279. Let's go bananas with paintings

Norbert G.J. Peeters, David Vergauwen, Ive De Smet

(2023) - Trends in Plant Science

DOI
2278. Monitoring of drought stress and transpiration rate using proximal thermal and hyperspectral imaging in an indoor automated plant phenotyping platform.

Mertens S, Verbraeken L, Sprenger H, De Meyer S, Demuynck K, Cannoot B, Merchie J, De Block J, Vogel JT, Bruce W, Nelissen H, Maere S, Inzé D, Wuyts N

(2023) - Plant methods

DOI
2277. Interspecies co‐expression analysis of lateral root development using inducible systems in rice, Medicago, and Arabidopsis

Hans Motte, Boris Parizot, Wei Xuan, Qian Chen, Steven Maere, Sandra Bensmihen, Tom Beeckman

(2023) - The Plant Journal

DOI
2276. Drug discovery-based approach identifies new nitrification inhibitors

Fabian Beeckman, Andrzej Drozdzecki, Alexa De Knijf, Mario Corrochano-Monsalve, Samuel Bodé, Pieter Blom, Geert Goeminne, Carmen Gonzalez-Murua, Sebastian Lücker, Pascal Boeckx, Christian V. Stevens, Dominique Audenaert, Tom Beeckman, Hans Motte

(2023) - Journal of Environmental Management

DOI
2275. The duplication of genomes and genetic networks and its potential for evolutionary adaptation and survival during environmental turmoil

Mehrshad Ebadi, Quinten Bafort, Eshchar Mizrachi, Pieter Audenaert, Pieter Simoens, Marc Van Montagu, Dries Bonte, Yves Van de Peer

(2023) - Proceedings of the National Academy of Sciences

DOI
2274. Cutaneous transcriptomic profiling and candidate pigment genes in the wild discus ( Symphysodon spp.)

Tian Tsyh Ng, Cher Chien Lau, Min Pau Tan, Li Lian Wong, Yeong Yik Sung, Tengku Sifzizul Tengku Muhammad, Yves Van de Peer, Sui LiYing, Muhd Danish-Daniel

(2023) - New Zealand Journal of Zoology

DOI
2273. Strigolactones repress nodule development and senescence in pea

Judith Van Dingenen, Annick De Keyser, Sandrien Desmet, Alexander Clarysse, Serge Beullens, Jan Michiels, Mélanie Planque, Sofie Goormachtig

(2023) - The Plant Journal

DOI
2272. 25 Years of thermomorphogenesis research: milestones and perspectives

Marcel Quint, Carolin Delker, Sureshkumar Balasubramanian, Martin Balcerowicz, Jorge J. Casal, Christian Danve M. Castroverde, Meng Chen, Xuemei Chen, Ive De Smet, Christian Fankhauser, Keara A. Franklin, Karen J. Halliday, Scott Hayes, Danhua Jiang, Jae-Hoon Jung, Eirini Kaiserli, S. Vinod Kumar, Daniel Maag, Eunkyoo Oh, Chung-Mo Park, Steven Penfield, Giorgio Perrella, Salomé Prat, Rodrigo S. Reis, Philip A. Wigge, Björn C. Willige, Martijn van Zanten

(2023) - Trends in Plant Science

DOI
2271. It is time to move: Heat-induced translocation events

Tingting Zhu, Shao-Li Yang, Ive De Smet

(2023) - Current Opinion in Plant Biology

DOI
2270. Spatial transcriptomics of a lycophyte root sheds light on root evolution.

Yang X, Poelmans W, Grones C, Lakehal A, Pevernagie J, Van Bel M, Njo M, Xu L, Nelissen H, De Rybel B, Motte H, Beeckman T

(2023) - Current biology : CB

DOI
2269. Editorial overview: Dynamics underlying plasticity and robustness.

De Rybel B, Dong J

(2023) - Current opinion in plant biology

DOI
2268. CysQuant: Simultaneous quantification of cysteine oxidation and protein abundance using data dependent or independent acquisition mass spectrometry.

Huang J, Staes A, Impens F, Demichev V, Van Breusegem F, Gevaert K, Willems P

(2023) - Redox biology

DOI
2267. Endosperm cell death promoted by NAC transcription factors facilitates embryo invasion in Arabidopsis

Nicolas M. Doll, Tom Van Hautegem, Neeltje Schilling, Riet De Rycke, Freya De Winter, Matyáš Fendrych, Moritz K. Nowack

(2023) - Current Biology

DOI
2266. Histone Deacetylases Regulate MORE AXILLARY BRANCHED 2-Dependent Germination of Arabidopsis thaliana

Arne Temmerman, Annick De Keyser, François-Didier Boyer, Sylwia Struk, Sofie Goormachtig

(2023) - Plant And Cell Physiology

DOI
2265. Seeking the interspecies crosswalk for filamentous microbe effectors

Naomi Stuer, Petra Van Damme, Sofie Goormachtig, Judith Van Dingenen

(2023) - Trends in Plant Science

DOI
2264. The winner’s curse under dependence: repairing empirical Bayes using convoluted densities

Stijn Hawinkel, Olivier Thas, Steven Maere

(2023) -

DOI
2263. Phosphorylation of ADAPTOR PROTEIN-2 μ-adaptin by ADAPTOR-ASSOCIATED KINASE1 regulates the tropic growth of Arabidopsis roots.

Siao W, Wang P, Zhao X, Vu LD, De Smet I, Russinova E

(2023) - The Plant cell

DOI
2262. SEC14-like condensate phase transitions at plasma membranes regulate root growth in Arabidopsis.

Liu C, Mentzelopoulou A, Papagavriil F, Ramachandran P, Perraki A, Claus L, Barg S, Dörmann P, Jaillais Y, Johnen P, Russinova E, Gizeli E, Schaaf G, Moschou PN

(2023) - PLoS biology

DOI
2261. Phase separation-based visualization of protein–protein interactions and kinase activities in plants

Alaeddine Safi, Wouter Smagghe, Amanda Maffioletti Mac Cord Gonçalves, Qing WANG, Ke Xu, Ana I. Fernandez, Benjamin CAPPE, Franck Riquet, evelien mylle, Dominique Eeckhout, Nancy De Winne, Eveline Van De Slijke, Freya Persyn, Geert Persiau, daniel van damme, Danny Geelen, Geert De Jaeger, Tom Beeckman, Jelle Van Leene, Steffen Vanneste

(2023) - The Plant Cell

DOI
2260. Protein phase separation in plant membrane biology: more than just a compartmentalization strategy

Jonathan Michael Dragwidge, Daniël Van Damme

(2023) - The Plant Cell

DOI
2259. Phosphorylation of ADAPTOR PROTEIN-2 μ-adaptin by ADAPTOR-ASSOCIATED KINASE1 regulates the tropic growth of Arabidopsis roots

Wei Siao, Peng Wang, Xiuyang Zhao, Lam Dai Vu, Ive De Smet, Eugenia Russinova

(2023) - The Plant Cell

DOI
2258. Spatial transcriptomics of a lycophyte root sheds light on root evolution.

Yang X, Poelmans W, Grones C, Lakehal A, Pevernagie J, Van Bel M, Njo M, Xu L, Nelissen H, De Rybel B, Motte H, Beeckman T

(2023) - Current biology : CB

DOI
2257. Genome and transcriptome of Selaginella kraussiana reveal evolution of root apical meristems in vascular plants.

Liu W, Cai G, Zhai N, Wang H, Tang T, Zhang Y, Zhang Z, Sun L, Zhang Y, Beeckman T, Xu L

(2023) - Current biology : CB

DOI
2256. Phase separation-based visualization of protein–protein interactions and kinase activities in plants

Alaeddine Safi, Wouter Smagghe, Amanda Maffioletti Mac Cord Gonçalves, Qing WANG, Ke Xu, Ana I. Fernandez, Benjamin CAPPE, Franck Riquet, evelien mylle, Dominique Eeckhout, Nancy De Winne, Eveline Van De Slijke, Freya Persyn, Geert Persiau, daniel van damme, Danny Geelen, Geert De Jaeger, Tom Beeckman, Jelle Van Leene, Steffen Vanneste

(2023) - The Plant Cell

DOI
2255. Trehalose-6-phosphate signaling regulates lateral root formation in Arabidopsis thaliana.

Morales-Herrera S, Jourquin J, Coppé F, Lopez-Galvis L, De Smet T, Safi A, Njo M, Griffiths CA, Sidda JD, Mccullagh JSO, Xue X, Davis BG, Beeckman T

(2023) - Proceedings of the National Academy of Sciences of the United States of America

DOI
2254. Spatial transcriptomics of a lycophyte root sheds light on root evolution.

Yang X, Poelmans W, Grones C, Lakehal A, Pevernagie J, Van Bel M, Njo M, Xu L, Nelissen H, De Rybel B, Motte H, Beeckman T

(2023) - Current biology : CB

DOI
2253. Cell type-specific attenuation of brassinosteroid signaling precedes stomatal asymmetric cell division.

Kim EJ, Zhang C, Guo B, Eekhout T, Houbaert A, Wendrich JR, Vandamme N, Tiwari M, Simon-Vezo C, Vanhoutte I, Saeys Y, Wang K, Zhu Y, De Rybel B, Russinova E

(2023) - Proceedings of the National Academy of Sciences of the United States of America

DOI
2252. A phloem‐localized Arabidopsis metacaspase (AtMC3) improves drought tolerance

Eugenia Pitsili, Ricardo Rodriguez‐Trevino, Nerea Ruiz‐Solani, Fatih Demir, Elizabeth Kastanaki, Charlene Dambire, Roger de Pedro Jové, Dominique Vercammen, Jose Salguero Linares, Hardy Hall, Melissa Mantz, Martin Schuler, Hannele Tuominen, Frank Van Breusegem, Marc Valls, Sergi Munné-Bosch, Michael Holdsworth, Pitter Huesgen, Antia Rodriguez-Villalon, Núria Sánchez Coll

(2023) - New Phytologist

DOI
2251. Combining multiplex gene editing and doubled haploid technology in maize

Lennert Impens, Christian D. Lorenzo, Wout Vandeputte, Pieter Wytynck, Kevin Debray, Jari Haeghebaert, Denia Herwegh, Thomas B. Jacobs, Tom Ruttink, Hilde Nelissen, Dirk Inzé, Laurens Pauwels

(2023) - New Phytologist

DOI
2250. Suppression of the Arabidopsis cinnamoyl-CoA reductase 1-6 intronic T-DNA mutation by epigenetic modification.

Wouters M, Bastiaanse H, Rombauts S, de Vries L, De Pooter T, Strazisar M, Neutelings G, Vanholme R, Boerjan W

(2023) - Plant physiology

DOI
2249. Cell type-specific attenuation of brassinosteroid signaling precedes stomatal asymmetric cell division.

Kim EJ, Zhang C, Guo B, Eekhout T, Houbaert A, Wendrich JR, Vandamme N, Tiwari M, Simon-Vezo C, Vanhoutte I, Saeys Y, Wang K, Zhu Y, De Rybel B, Russinova E

(2023) - Proceedings of the National Academy of Sciences of the United States of America

DOI
2248. Structural and functional diversity in plant specialized metabolism signals and products: The case of oxylipins and triterpenes

Elia Lacchini, Jhon Venegas-Molina, Alain Goossens

(2023) - Current Opinion in Plant Biology

DOI
2247. A conserved signaling axis integrates conflicting environmental drought and heat signals to control stomatal aperture in plants

De Smet I, Xu X, Praat M, Pizzio G, Jiang Z, Driever S, Wang R, de Cotte Bv, Villers S, Gevaert K, LEONHARDT N, Nelissen H, Kinoshita T, Vanneste S, Vu L

(2023) -

DOI
2246. Functional annotation of proteins for signaling network inference in non-model species

Lisa Van den Broeck, Dinesh Kiran Bhosale, Kuncheng Song, Cassio Flavio Fonseca de Lima, Michael Ashley, Tingting Zhu, Shanshuo Zhu, Brigitte Van De Cotte, Pia Neyt, Anna C. Ortiz, Tiffany R. Sikes, Jonas Aper, Peter Lootens, Anna M. Locke, Ive De Smet, Rosangela Sozzani

(2023) - Nature Communications

DOI
2245. When drought meets heat - a plant omics perspective.

Xu X, Fonseca de Lima CF, Vu LD, De Smet I

(2023) - Frontiers in plant science

DOI
2244. Cytokinin Promotes Jasmonic Acid Accumulation in the Control of Maize Leaf Growth

Aimee N. Uyehara, Angel R. Del Valle-Echevarria, Charles T. Hunter, Hilde Nelissen, Kirin Demuynck, James F. Cahill, Zachary Gorman, Georg Jander, Michael G. Muszynski

(2023) - Plants

DOI
2243. Combining multiplex gene editing and doubled haploid technology in maize

Lennert Impens, Christian D. Lorenzo, Wout Vandeputte, Pieter Wytynck, Kevin Debray, Jari Haeghebaert, Denia Herwegh, Thomas B. Jacobs, Tom Ruttink, Hilde Nelissen, Dirk Inzé, Laurens Pauwels

(2023) - New Phytologist

DOI
2242. GOLVEN peptides regulate lateral root spacing as part of a negative feedback loop on the establishment of auxin maxima

Joris Jourquin, Ana Ibis Fernandez, Qing Wang, Ke Xu, Jian Chen, Jan Šimura, Karin Ljung, Steffen Vanneste, Tom Beeckman, Hideki Takahashi

(2023) - Journal of Experimental Botany

DOI
2241. Plastid-localized amino acid metabolism coordinates rice ammonium tolerance and nitrogen use efficiency.

Xie Y, Lv Y, Jia L, Zheng L, Li Y, Zhu M, Tian M, Wang M, Qi W, Luo L, De Gernier H, Pélissier PM, Motte H, Lin S, Luo L, Xu G, Beeckman T, Xuan W

(2023) - Nature plants

DOI
2240. TPLATE complex-dependent endocytosis attenuates CLAVATA1 signaling for shoot apical meristem maintenance.

Jie Wang, qihang jiang, Roman Pleskot, Peter Grones, Elmehdi Bahafid, DENAY Grégoire, C.S. Galvan-Ampudia, xiangyu xu, Michaël Vandorpe, Mylle E, Ive De Smet, Teva Vernoux, Rüdiger Simon, Moritz Nowack, daniel van damme

(2023) - EMBO reports

DOI
2239. Distinctive and complementary roles of E2F transcription factors during plant replication stress responses.

Nisa M, Eekhout T, Bergis C, Pedroza-Garcia JA, He X, Mazubert C, Vercauteren I, Cools T, Brik-Chaouche R, Drouin-Wahbi J, Chmaiss L, Latrasse D, Raynaud C

(2023) - Molecular plant

DOI
2238. Comprehensive regulatory networks for tomato organ development based on the genome and RNAome of MicroTom tomato.

Xue JY, Fan HY, Zeng Z, Zhou YH, Hu SY, Li SX, Cheng YJ, Meng XR, Chen F, Shao ZQ, Van de Peer Y

(2023) - Horticulture research

DOI
2237. Whole-genome Duplications and the Long-term Evolution of Gene Regulatory Networks in Angiosperms

Fabricio Almeida-Silva, Yves Van de Peer, Michael Purugganan

(2023) - Molecular Biology and Evolution

DOI
2236. Ocean current patterns drive the worldwide colonization of eelgrass (Zostera marina)

Lei Yu, Marina Khachaturyan, Michael Matschiner, Adam Healey, Diane Bauer, Brenda Cameron, Mathieu Cusson, J. Emmett Duffy, Fredrick Fodrie, Diana Gill, Jane Grimwood, Masakazu HORI, Kevin Hovel, A. Randall Hughes, Marlene Jahnke, Jerry Jenkins, Keykhosrow Keymanesh, Claudia Kruschel, Sujan Mamidi, Damian Menning, Per-Olav Moksnes, Masahiro Nakaoka, Christa Pennacchio, Katrin Reiss, rossi francesca, Jennifer Ruesink, Stewart T. Schultz, Sandra Talbot, Richard Unsworth, David H. Ward, Tal Dagan, Jeremy Schmutz, Jonathan A. Eisen, John Stachowicz, Yves Van de Peer, Jeanine L. Olsen, Thorsten B. H. Reusch

(2023) - Nature Plants

DOI
2235. Non‐specific effects of the CINNAMATE‐4‐HYDROXYLASE inhibitor piperonylic acid

Ilias El Houari, Petr Klíma, Alexandra Baekelandt, Paul E. Staswick, Veselina Uzunova, Charo I. Del Genio, Ward Steenackers, Petre I. Dobrev, Roberta Filepová, Ondrej Novák, Richard Napier, Jan Petrasek, Dirk Inzé, Wout Boerjan, Bartel Vanholme

(2023) - The Plant Journal

DOI
2234. TPLATE complex-dependent endocytosis attenuates CLAVATA1 signaling for shoot apical meristem maintenance.

Wang J, Jiang Q, Pleskot R, Grones P, Bahafid E, Denay G, Galván-Ampudia C, Xu X, Vandorpe M, Mylle E, De Smet I, Vernoux T, Simon R, Nowack MK, Van Damme D

(2023) - EMBO reports

DOI
2233. How will I recognize you? Insights into endocytic cargo recognition in plants.

De Meyer A, Grones P, Van Damme D

(2023) - Current opinion in plant biology

DOI
2232. TPLATE complex-dependent endocytosis attenuates CLAVATA1 signaling for shoot apical meristem maintenance.

Wang J, Jiang Q, Pleskot R, Grones P, Bahafid E, Denay G, Galván-Ampudia C, Xu X, Vandorpe M, Mylle E, De Smet I, Vernoux T, Simon R, Nowack MK, Van Damme D

(2023) - EMBO reports

DOI
2231. Fertility loss in senescing Arabidopsis ovules is controlled by the maternal sporophyte via a NAC transcription factor triad

Matthias Van Durme, Yadira Olvera-Carrillo, Marie L. Pfeiffer, Nicolas M. Doll, Freya De Winter, Zongcheng Lin, Moritz K. Nowack

(2023) - Proceedings of the National Academy of Sciences

DOI
2230. SIAMESE-RELATED1 imposes differentiation of stomatal lineage ground cells into pavement cells

Marieke Dubois, Ignacio Achon, Robert A. Brench, Stefanie Polyn, Rubén Tenorio Berrío, Ilse Vercauteren, Julie E. Gray, Dirk Inzé, Lieven De Veylder

(2023) - Nature Plants

DOI
2229. Identification and characterization of CYP71 subclade cytochrome P450 enzymes involved in the biosynthesis of bitterness compounds in Cichorium intybus

Charlotte De Bruyn, Tom Ruttink, Elia Lacchini, Stephane Rombauts, Annelies Haegeman, Ellen De Keyser, Christof Van Poucke, Sandrien Desmet, Thomas B. Jacobs, Tom Eeckhaut, Alain Goossens, Katrijn Van Laere

(2023) - Frontiers in Plant Science

DOI
2228. Ulva: An emerging green seaweed model for systems biology

Jonas Blomme, Thomas Wichard, Thomas B. Jacobs, Olivier De Clerck

(2023) - Journal of Phycology

DOI
2227. Genomic Insights into Adaptation to Karst Limestone and Incipient Speciation in East Asian Platycarya spp. (Juglandaceae)

Yu Cao, Fabricio Almeida-Silva, Wei-Ping Zhang, Ya-Mei Ding, Dan Bai, Wei-Ning Bai, Bo-Wen Zhang, Yves Van de Peer, Da-Yong Zhang, Michael Purugganan

(2023) - Molecular Biology and Evolution

DOI
2226. Diploid and tetraploid genomes of Acorus and the evolution of monocots

Liang Ma, Ke-Wei Liu, Zhen Li, Yuyun hsiao, Yiying Qi, Tao Fu, Guang-Da Tang, Diyang Zhang, Wei-Hong Sun, Ding-Kun Liu, Yuanyuan Li, Gui-Zhen Chen, Xue-Die Liu, Xing-Yu Liao, Yu-Ting Jiang, Xia Yu, Yang Hao, Jie Huang, Xue-Wei Zhao, Shijie Ke, You-Yi Chen, Wan-Lin Wu, Jui-Ling Hsu, Yu-Fu Lin, Ming-Der Huang, Chia-Ying Li, Laiqiang Huang, Zhi-Wen Wang, Xiang Zhao, Wen-Ying Zhong, Dong-Hui Peng, Sagheer Ahmad, Siren Lan, Jisen Zhang, Wen-Chieh Tsai, Yves Van de Peer, Zhong-Jian Liu

(2023) - Nature Communications

DOI
2225. A panoramic view of the genomic landscape of the genus Streptomyces

Marios Nikolaidis, Andrew Hesketh, Nikoletta Frangou, Dimitris Mossialos, Yves Van de Peer, Stephen G. Oliver, Grigorios D. Amoutzias

(2023) - Microbial Genomics

DOI
2224. A Cas3-base editing tool for targetable in vivo mutagenesis

Anna Zimmermann, Julian E. Prieto-Vivas, Charlotte Cautereels, Anton Gorkovskiy, Jan Steensels, Yves Van de Peer, Kevin J. Verstrepen

(2023) - Nature Communications

DOI
2223. QT-GWAS: A novel method for unveiling biosynthetic loci affecting qualitative metabolic traits.

Brouckaert M, Peng M, Höfer R, El Houari I, Darrah C, Storme V, Saeys Y, Vanholme R, Goeminne G, Timokhin VI, Ralph J, Morreel K, Boerjan W

(2023) - Molecular plant

DOI
2222. Plasmodesmata mediate cell-to-cell transport of brassinosteroid hormones.

Wang Y, Perez-Sancho J, Platre MP, Callebaut B, Smokvarska M, Ferrer K, Luo Y, Nolan TM, Sato T, Busch W, Benfey PN, Kvasnica M, Winne JM, Bayer EM, Russinova E

(2023) - Nature chemical biology

DOI
2221. Identification and characterization of CYP71 subclade cytochrome P450 enzymes involved in the biosynthesis of bitterness compounds in Cichorium intybus.

De Bruyn C, Ruttink T, Lacchini E, Rombauts S, Haegeman A, De Keyser E, Van Poucke C, Desmet S, Jacobs TB, Eeckhaut T, Goossens A, Van Laere K

(2023) - Frontiers in plant science

DOI
2220. Engineering the plant metabolic system by exploiting metabolic regulation

Sara Selma, Nikolaos Ntelkis, Trang Hieu Nguyen, Alain Goossens

(2023) - The Plant Journal

DOI
2219. A redundant transcription factor network steers spatiotemporal Arabidopsis triterpene synthesis

Hieu Nguyen Trang, Louis Thiers, Alex Van Moerkercke, Yuechen Bai, Patricia Fernández Calvo, Max Minne, Thomas Depuydt, Maite Colinas, Kevin Verstaen, Gert Van Isterdael, Hans-Wilhelm Nützmann, Anne Osbourn, Yvan Saeys, Bert De Rybel, Klaas Vandepoele, Andres Ritter, Alain Goossens

(2023) - Nature Plants

DOI
2218. Structure-function study of a Ca²⁺-independent metacaspase involved in lateral root emergence.

Stael S, Sabljić I, Audenaert D, Andersson T, Tsiatsiani L, Kumpf RP, Vidal-Albalat A, Lindgren C, Vercammen D, Jacques S, Nguyen L, Njo M, Van Breusegem F

(2023) - Proceedings of the National Academy of Sciences of the United States of America

DOI
2217. Mutation of Arabidopsis SME1 and Sm core assembly improves oxidative stress resilience

Patrick Willems, Valerie Van Ruyskensvelde, Takanori Maruta, Robin Pottie, Álvaro D. Fernández-Fernández, Jarne Pauwels, Matthew A. Hannah, Kris Gevaert, Frank Van Breusegem, Katrien Van der Kelen

(2023) - Free Radical Biology and Medicine

DOI
2216. Oxidative stress responses in plants.

Van Breusegem F, Remacle C

(2023) - Free radical biology & medicine

DOI
2215. Maximizing the production of high-value chemicals via fast-pyrolysis of lignin-engineered poplars: Impact of cinnamyl alcohol dehydrogenase 1 (hpCAD) downregulation

Liang Li, Florence H. Vermeire, Ruben Van de Vijver, Marlies Wouters, Wout Boerjan, Kevin M. Van Geem

(2023) - Journal of Analytical and Applied Pyrolysis

DOI
2214. Paving the way towards future‐proofing our crops

Alexandra Baekelandt, Philippe Nacry, Aleksandra Malyska, Marc Cornelissen, Amrit Kaur Nanda, Nair, Abhishek, Peter Rogowsky, Laurens Pauwels, BERTRAND MULLER, Jonas Collén, Jonas Blomme, Mathias Pribil, Lars Scharff, Jessica Davies, Ralf Wilhelm, Norbert Rolland, Jeremy Harbinson, Wout Boerjan, Erik Murchie, Alexandra J Gibbs, Jean-Pierre COHAN, Philippe Debaeke, Sébastien Thomine, Dirk Inzé, René Klein Lankhorst, Martin Parry

(2023) - Food and Energy Security

DOI
2213. Unravelling the bacterial community composition of Valerianella locusta, a cold tolerant plant

Sonia Garcia Mendez, Antoine Persyn, Caroline De Tender, Sofie Goormachtig, Anne Willems

(2023) - Phytobiomes Journal

DOI
2212. It takes three to tango: citizen, fundamental and applied science

Lena Vlaminck, Birgit Vanden Berghen, Liesbet Vranken, Sofie Goormachtig

(2023) - Trends in Plant Science

DOI
2211. Characterization of Arbuscular Mycorrhizal Effector Proteins

María V. Aparicio Chacón, Judith Van Dingenen, Sofie Goormachtig

(2023) - International Journal of Molecular Sciences

DOI
2210. Predicting yield of individual field-grown rapeseed plants from rosette-stage leaf gene expression

Sam De Meyer, Daniel Felipe Cruz Galvis, Tom De Swaef, Peter Lootens, Jolien De Block, Kevin Bird, Heike Sprenger, Michael Van de Voorde, Stijn Hawinkel, Tom Van Hautegem, Dirk Inzé, Hilde Nelissen, Isabel Roldán-Ruiz, Steven Maere, Kiran Raosaheb Patil

(2023) - PLOS Computational Biology

DOI
2209. BRASSINOSTEROID INSENSITIVE1 internalization can occur independent of ligand binding.

Neubus Claus LA, Liu D, Hohmann U, Vukašinović N, Pleskot R, Liu J, Schiffner A, Jaillais Y, Wu G, Wolf S, Van Damme D, Hothorn M, Russinova E

(2023) - Plant physiology

DOI
2208. A redundant transcription factor network steers spatiotemporal Arabidopsis triterpene synthesis.

Nguyen TH, Thiers L, Van Moerkercke A, Bai Y, Fernández-Calvo P, Minne M, Depuydt T, Colinas M, Verstaen K, Van Isterdael G, Nützmann HW, Osbourn A, Goossens A

(2023) - Nature plants

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2207. BRASSINOSTEROID INSENSITIVE1 internalization can occur independent of ligand binding.

Neubus Claus LA, Liu D, Hohmann U, Vukašinović N, Pleskot R, Liu J, Schiffner A, Jaillais Y, Wu G, Wolf S, Van Damme D, Hothorn M, Russinova E

(2023) - Plant physiology

DOI
2206. Dynamic GOLVEN-ROOT GROWTH FACTOR 1 INSENSITIVE signaling in the root cap mediates root gravitropism

Ke Xu, Joris Jourquin, Xiangyu Xu, Ive De Smet, Ana I Fernandez, Tom Beeckman

(2023) - Plant Physiology

DOI
2205. PlantACT! – how to tackle the climate crisis

Heribert Hirt, Salim Al-Babili, Marilia Almeida-Trapp, Antoine Martin, Manuel Aranda, Dorothea Bartels, Malcolm Bennett, Ikram Blilou, Damian Boer, Alix Boulouis, Chris Bowler, Sophie Brunel-Muguet, Fabien Chardon, Jean Colcombet, Vincent Colot, Agata Daszkowska-Golec, Jose R. Dinneny, Ben Field, Katja Froehlich, Catherine H. Gardener, Alain Gojon, Eric Gomès, Eva María Gomez-Alvarez, Crisanto Gutierrez, Michel Havaux, Scott Hayes, Edith Heard, Michael Hodges, Amal Khalaf Alghamdi, Laurent Laplaze, Kyle J. Lauersen, Nathalie Leonhardt, Xenie Johnson, Jonathan Jones, Hannes Kollist, Stanislav Kopriva, Anne Krapp, Mauricio Lopez-Portillo Masson, Matthew F. McCabe, Livia Merendino, Antonio Molina, Jose L. Moreno Ramirez, Bernd Mueller-Roeber, Michael Nicolas, Ido Nir, Izamar Olivas Orduna, Jose M. Pardo, Jean-Philippe Reichheld, Pedro L. Rodriguez, Hatem Rouached, Maged M. Saad, Ive De Smet

(2023) - Trends in Plant Science

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2204. MINI-AC: Inference of plant gene regulatory networks using bulk or single-cell accessible chromatin profiles

Manosalva Pérez N, Ferrari C, Engelhorn J, Depuydt T, Nelissen H, Hartwig T, Vandepoele K

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DOI
2203. Predicting yield of individual field-grown rapeseed plants from rosette-stage leaf gene expression.

De Meyer S, Cruz DF, De Swaef T, Lootens P, De Block J, Bird K, Sprenger H, Van de Voorde M, Hawinkel S, Van Hautegem T, Inzé D, Nelissen H, Maere S

(2023) - PLoS computational biology

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2202. The cutting edge of grass leaves.

Zhang J, Nelissen H

(2023) - Nature plants

DOI
2201. Structure–function study of a Ca ²⁺ -independent metacaspase involved in lateral root emergence

Simon Stael, Igor Sabljić, Dominique Audenaert, Thilde Andersson, Liana Tsiatsiani, Robert P. Kumpf, Andreu Vidal-Albalat, Cecilia Lindgren, Dominique Vercammen, Silke Jacques, Long Nguyen, Maria Njo, Alvaro Daniel Fernandez Fernandez, Tine Beunens, Evy Timmerman, Kris Gevaert, Marc Van Montagu, Jerry Ståhlberg, Peter Bozhkov, Anna Linusson, Tom Beeckman, Frank Van Breusegem

(2023) - Proceedings of the National Academy of Sciences

DOI
2200. Dynamic GOLVEN-ROOT GROWTH FACTOR 1 INSENSITIVE signaling in the root cap mediates root gravitropism

Ke Xu, Joris Jourquin, Xiangyu Xu, Ive De Smet, Ana I Fernandez, Tom Beeckman

(2023) - Plant Physiology

DOI
2199. Cysteine thiol-based post-translational modification: What do we know about transcription factors?

Heng Zhou, Jingjing Huang, Patrick Willems, Frank Van Breusegem, Yanjie Xie

(2023) - Trends in Plant Science

DOI
2198. Mechanisms controlling plant proteases and their substrates

Álvaro Daniel Fernández-Fernández, Simon Stael, Frank Van Breusegem

(2023) - Cell Death & Differentiation

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2197. PAT1-type GRAS-domain proteins control regeneration by activating DOF3.4 to drive cell proliferation in Arabidopsis roots

Anchal Bisht, Thomas Eekhout, Balkan Canher, Ran Lu, Ilse Vercauteren, Geert De Jaeger, Jefri Heyman, Lieven De Veylder

(2023) - The Plant Cell

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2196. SMAP design: a multiplex PCR amplicon and gRNA design tool to screen for natural and CRISPR-induced genetic variation

Ward Develtere, Evelien Waegneer, Kevin Debray, Jonas De Saeger, Sabine Van Glabeke, Steven Maere, Tom Ruttink, Thomas B Jacobs

(2023) - Nucleic Acids Research

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2195. Analyses of a chromosome-scale genome assembly reveal the origin and evolution of cultivated chrysanthemum.

Song A, Su J, Wang H, Zhang Z, Zhang X, Van de Peer Y, Chen F, Fang W, Guan Z, Zhang F, Wang Z, Wang L, Ding B, Zhao S, Ding L, Liu Y, Zhou L, He J, Chen F

(2023) - Nature communications

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2194. Standing genetic variation fuels rapid evolution of herbicide resistance in blackgrass.

Kersten S, Chang J, Huber CD, Voichek Y, Lanz C, Hagmaier T, Lang P, Lutz U, Hirschberg I, Lerchl J, Porri A, Van de Peer Y, Schmid K, Weigel D, Rabanal FA

(2023) - Proceedings of the National Academy of Sciences of the United States of America

DOI
2193. The CIPK23 protein kinase represses SLAC1‐type anion channels in Arabidopsis guard cells and stimulates stomatal opening

Shouguang Huang, Tobias Maierhofer, Kenji Hashimoto, Xiangyu Xu, Sohail M. Karimi, Heike Müller, Michael A. Geringer, Yi Wang, Jörg Kudla, Ive De Smet, Rainer Hedrich, Dietmar Geiger, M. Rob G. Roelfsema

(2023) - New Phytologist

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2192. Editorial: #ArtGenetics - looking at art to trace plant evolution.

De Smet I, Vergauwen D

(2023) - Frontiers in plant science

DOI
2191. PhenoWell®—A novel screening system for soil‐grown plants

Ji Li, Michael A. C. Mintgen, Sam D'Haeyer, Anne Helfer, Hilde Nelissen, Dirk Inzé, Stijn Dhondt

(2023) - Plant-Environment Interactions

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2190. The transcription factor AtMYB12 is part of a feedback loop regulating cell division orientation in the root meristem vasculature.

Wybouw B, Arents HE, Yang B, Nolf J, Smet W, Vandorpe M, Minne M, Luo X, De Clercq I, Van Damme D, Glanc M, De Rybel B

(2023) - Journal of experimental botany

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2189. SCARECROW‐LIKE28 modulates organ growth in Arabidopsis by controlling mitotic cell cycle exit, endoreplication, and cell expansion dynamics

Camila Goldy, Virginia Barrera, Isaiah Taylor, Celeste Buchensky, Rodrigo Vena, Philip N. Benfey, Lieven De Veylder, Ramiro E. Rodriguez

(2023) - New Phytologist

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2188. Plant lineage-specific PIKMIN1 drives APC/CCCS52A2 E3-ligase activity-dependent cell division

Alex Willems, Yuanke Liang, Jefri Heyman, Thomas Depuydt, Thomas Eekhout, Balkan Canher, Hilde Van den Daele, Ilse Vercauteren, Klaas Vandepoele, Lieven De Veylder

(2023) - Plant Physiology

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2187. Neutral processes underlying the macro eco-evolutionary dynamics of mixed-ploidy systems.

Kauai F, Mortier F, Milosavljevic S, Van de Peer Y, Bonte D

(2023) - Proceedings. Biological sciences

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2186. Endoplasmic reticulum–bound ANAC013 factor is cleaved by RHOMBOID-LIKE 2 during the initial response to hypoxia in Arabidopsis thaliana

Emese Eysholdt-Derzsó, Tilo Renziehausen, Stephanie Frings, Stephanie Frohn, Kira von Bongartz, Clara P. Igisch, Justina Mann, Lisa Häger, Julia Macholl, David Leisse, Niels Hoffmann, Katharina Winkels, Pia Wanner, Jonas De Backer, Xiaopeng Luo, Margret Sauter, Inge De Clercq, Joost T. van Dongen, Jozefus Schippers, Romy Schmidt-Schippers

(2023) - Proceedings of the National Academy of Sciences

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2185. The transcription factor AtMYB12 is part of a feedback loop regulating cell division orientation in the root meristem vasculature

Brecht Wybouw, Helena E Arents, Baojun Yang, Jonah Nolf, Wouter Smet, Michael Vandorpe, Max Minne, Xiaopeng Luo, Inge De Clercq, Daniël Van Damme, Matouš Glanc, Bert De Rybel, Simon Turner

(2023) - Journal of Experimental Botany

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2184. Brassinosteroid gene regulatory networks at cellular resolution in the Arabidopsis root

Trevor Nolan, Nemanja Vukasinovic, Che-Wei Hsu, Jingyuan Zhang, Isabelle Vanhoutte, Rachel Shahan, Isaiah Taylor, Laura Greenstreet, Matthieu Heitz, Anton Afanassiev, Ping Wang, Pablo Szekely, Aiden Brosnan, Yanhai Yin, Geoffrey Schiebinger, Uwe Ohler, Eugenia Russinova, Philip Benfey

(2023) - Science

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2183. Cell-specific clock-controlled gene expression program regulates rhythmic fiber cell growth in cotton.

Wang D, Hu X, Ye H, Wang Y, Yang Q, Liang X, Wang Z, Zhou Y, Wen M, Yuan X, Zheng X, Ye W, Guo B, Yusuyin M, Russinova E, Zhou Y, Wang K

(2023) - Genome biology

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2182. The saponin bomb: a nucleolar-localized β-glucosidase hydrolyzes triterpene saponins in Medicago truncatula.

Lacchini E, Erffelinck ML, Mertens J, Marcou S, Molina-Hidalgo FJ, Tzfadia O, Venegas-Molina J, Cárdenas PD, Pollier J, Tava A, Bak S, Höfte M, Goossens A

(2023) - The New phytologist

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2181. The transcription factor AtMYB12 is part of a feedback loop regulating cell division orientation in the root meristem vasculature

Brecht Wybouw, Helena E Arents, Baojun Yang, Jonah Nolf, Wouter Smet, Michael Vandorpe, Max Minne, Xiaopeng Luo, Inge De Clercq, Daniël Van Damme, Matouš Glanc, Bert De Rybel, Simon Turner

(2023) - Journal of Experimental Botany

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2180. Specification and evolution of lateral roots.

Lakehal A, Dob A, Beeckman T

(2023) - Current biology : CB

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2179. Repressive ZINC FINGER OF ARABIDOPSIS THALIANA proteins promote programmed cell death in the Arabidopsis columella root cap

Qiangnan Feng, Marta Cubría-Radío, Tereza Vavrdová, Freya De Winter, Neeltje Schilling, Marlies Huysmans, Amrit K Nanda, Charles W Melnyk, Moritz K Nowack

(2023) - Plant Physiology

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2178. Spatial and temporal regulation of parent-of-origin allelic expression in the endosperm.

Yuri Stephan van Ekelenburg, Karina Hornslien, Tom Van Hautegem, Matyas Fendrych, Gert Van Isterdael, Katrine N. Bjerkan, Jason R. Miller, Moritz Nowack, Norbert BOLLIER, Paul E. Grini

(2023) - Plant Physiology

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2177. Accelerating wood domestication in forest trees through genome editing: Advances and prospects

Chantal Anders, Lennart Hoengenaert, Wout Boerjan

(2023) - Current Opinion in Plant Biology

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2176. The immediate effects of polyploidization of Spirodela polyrhiza change in a strain-specific way along environmental gradients

Quinten Bafort, Tian Wu, Annelore Natran, Olivier De Clerck, Yves Van de Peer

(2023) - Evolution Letters

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2175. The Saururus chinensis genome provides insights into the evolution of pollination strategies and herbaceousness in magnoliids.

Xue JY, Li Z, Hu SY, Kao SM, Zhao T, Wang JY, Wang Y, Chen M, Qiu Y, Fan HY, Liu Y, Shao ZQ, Van de Peer Y

(2023) - The Plant journal : for cell and molecular biology

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2174. Revisiting ancient polyploidy in leptosporangiate ferns

Hengchi Chen, Yuhan Fang, Arthur Zwaenepoel, Sanwen Huang, Yves Van de Peer, Zhen Li

(2023) - New Phytologist

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2173. Reassessing the claimed cytokinin-substituting activity of dehydrodiconiferyl alcohol glucoside.

Witvrouw K, Kim H, Vanholme R, Goeminne G, Ralph J, Boerjan W, Vanholme B

(2023) - Proceedings of the National Academy of Sciences of the United States of America

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2172. From prediction to function: Current practices and challenges towards the functional characterization of type III effectors.

Joren De Ryck, Petra Van Damme, Goormachtig S

(2023) - Frontiers in Microbiology

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2171. The Non-JAZ TIFY Protein TIFY8 of Arabidopsis thaliana Interacts with the HD-ZIP III Transcription Factor REVOLUTA and Regulates Leaf Senescence.

Andrade Galan AG, Doll J, Saile SC, Wünsch M, Roepenack-Lahaye EV, Pauwels L, Goossens A, Bresson J, Zentgraf U

(2023) - International journal of molecular sciences

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2170. Single Cell RNA-Sequencing in Arabidopsis Root Tissues.

Ke Y, Minne M, Eekhout T, De Rybel B

(2023) - Methods in molecular biology (Clifton, N.J.)

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2169. Quantitative Measurements of Biochemical and Molecular Markers of Oxidative Stress Signaling and Responses.

Noctor G, Cohen M, Trémulot L, Van Breusegem F, Mhamdi A

(2023) - Methods in molecular biology (Clifton, N.J.)

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2168. Metabolite modification in oxidative stress responses: A case study of two defense hormones.

Lelarge-Trouverie C, Cohen M, Trémulot L, Van Breusegem F, Mhamdi A, Noctor G

(2023) - Free radical biology & medicine

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2167. Detection and Quantification of Protein Aggregates in Plants.

Phukan UJ, Stael S, Gonçalves A, Van Breusegem F, Coll NS

(2023) - Methods in molecular biology (Clifton, N.J.)

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2166. Evolution of wound-activated regeneration pathways in the plant kingdom.

Liang Y, Heyman J, Lu R, De Veylder L

(2023) - European journal of cell biology

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2165. BREEDIT: a multiplex genome editing strategy to improve complex quantitative traits in maize

Christian Damian Lorenzo, Kevin Debray, Denia Herwegh, Ward Develtere, lennert impens, Dries Schaumont, Wout Vandeputte, Stijn Aesaert, Griet Coussens, Yara De Boe, Kirin Demuynck, Tom Van Hautegem, Laurens Pauwels, Thomas B. Jacobs, Tom Ruttink, Hilde Nelissen, Dirk Inzé

(2023) - The Plant Cell

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2164. Systematic optimization of Cas12a base editors in wheat and maize using the ITER platform

Christophe Gaillochet, Alexandra Peña Fernández, Vera Goossens, Katelijn D’Halluin, Andrzej Drozdzecki, Myriam Shafie, Julie Van Duyse, Gert Van Isterdael, Camila Gonzalez, Mattias Vermeersch, Jonas De Saeger, Ward Develtere, Dominique Audenaert, David De Vleesschauwer, Frank Meulewaeter, Thomas B. Jacobs

(2023) - Genome Biology

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2163. syntenet: an R/Bioconductor package for the inference and analysis of synteny networks.

Almeida-Silva F, Zhao T, Ullrich KK, Schranz ME, Van de Peer Y

(2023) - Bioinformatics (Oxford, England)

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2162. Studying Whole-Genome Duplication Using Experimental Evolution of Spirodela polyrhiza.

Wu T, Natran A, Prost L, Aydogdu E, Van de Peer Y, Bafort Q

(2023) - Methods in molecular biology (Clifton, N.J.)

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2161. Studying Whole-Genome Duplication Using Experimental Evolution of Chlamydomonas.

Bafort Q, Prost L, Aydogdu E, Van de Vloet A, Casteleyn G, Van de Peer Y, De Clerck O

(2023) - Methods in molecular biology (Clifton, N.J.)

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2160. Inference of Ancient Polyploidy Using Transcriptome Data.

Li J, Van de Peer Y, Li Z

(2023) - Methods in molecular biology (Clifton, N.J.)

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2159. The genome of the king protea, Protea cynaroides

Jiyang Chang, Tuan A. Duong, Cassandra Schoeman, Xiao Ma, Danielle Roodt, Nigel Barker, Zhen Li, Yves Van de Peer, Eshchar Mizrachi

(2023) - The Plant Journal

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2158. Downregulation of barley ferulate 5-hydroxylase dramatically alters straw lignin structure without impact on mechanical properties.

Shafiei R, Hooper M, McClellan C, Oakey H, Stephens J, Lapierre C, Tsuji Y, Goeminne G, Vanholme R, Boerjan W, Ralph J, Halpin C

(2023) - Frontiers in plant science

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2157. SMAP design: a multiplex PCR amplicon and gRNA design tool to screen for natural and CRISPR-induced genetic variation

Ward Develtere, Evelien Waegneer, Kevin Debray, Jonas De Saeger, Sabine Van Glabeke, Steven Maere, Tom Ruttink, Thomas B. Jacobs

(2023) - Nucleic Acids Research

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2156. Cellular Thermal Shift Assay for the Detection of Small Molecule-Target Interactions in Arabidopsis Cells.

Lu Q, Russinova E

(2023) - Methods in molecular biology (Clifton, N.J.)

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2155. Adaptor protein complex interaction map in Arabidopsis identifies P34 as a common stability regulator.

Wang P, Siao W, Zhao X, Arora D, Wang R, Eeckhout D, Van Leene J, Kumar R, Houbaert A, De Winne N, Mylle E, Vandorpe M, Korver RA, Testerink C, Russinova E

(2023) - Nature plants

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2154. Rhizogenic Agrobacterium protein RolB interacts with the TOPLESS repressor proteins to reprogram plant immunity and development.

Gryffroy L, Ceulemans E, Manosalva Pérez N, Venegas-Molina J, Jaramillo-Madrid AC, Rodrigues SD, De Milde L, Jonckheere V, Van Montagu M, Goossens A

(2023) - Proceedings of the National Academy of Sciences of the United States of America

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2153. Identification of Plant Protein-Metabolite Interactions by Limited Proteolysis-Coupled Mass Spectrometry (LiP-MS).

Venegas-Molina J, Van Damme P, Goossens A

(2023) - Methods in molecular biology (Clifton, N.J.)

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2152. Cataloguing Protein Complexes In Planta Using TurboID-Catalyzed Proximity Labeling.

Gryffroy L, De Ryck J, Jonckheere V, Goormachtig S, Goossens A, Van Damme P

(2023) - Methods in molecular biology (Clifton, N.J.)

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2151. Adaptor protein complex interaction map in Arabidopsis identifies P34 as a common stability regulator

Peng Wang, Wei Siao, Xiuyang Zhao, Deepanksha Arora, Ren Wang, Dominique Eeckhout, Jelle Van Leene, Rahul Kumar, Anaxi Houbaert, Nancy De Winne, evelien mylle, Michaël Vandorpe, Ruud A. Korver, Christa Testerink, Kris Gevaert, Steffen Vanneste, Geert De Jaeger, daniel van damme, Eugenia Russinova

(2023) - Nature Plants

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2150. Auxin-Responsive (Phospho)proteome Analysis Reveals Key Biological Processes and Signaling Associated with Shoot-Borne Crown Root Development in Rice.

Singh H, Singh Z, Zhu T, Xu X, Waghmode B, Garg T, Yadav S, Sircar D, De Smet I, Yadav SR

(2023) - Plant & cell physiology

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2149. Targeted Profiling of Protein Phosphorylation in Plants.

Xu X, Gevaert K, De Smet I, Vu LD

(2023) - Methods in molecular biology (Clifton, N.J.)

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2148. BREEDIT: a multiplex genome editing strategy to improve complex quantitative traits in maize

Christian Damian Lorenzo, Kevin Debray, Denia Herwegh, Ward Develtere, lennert impens, Dries Schaumont, Wout Vandeputte, Stijn Aesaert, Griet Coussens, Yara De Boe, Kirin Demuynck, Tom Van Hautegem, Laurens Pauwels, Thomas B. Jacobs, Tom Ruttink, Hilde Nelissen, Dirk Inzé

(2023) - The Plant Cell

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2147. Burning questions for a warming and changing world: 15 unknowns in plant abiotic stress

Paul Verslues, Julia Bailey-Serres, Craig Brodersen, Thomas N. Buckley, Lucio Conti, Alexander Christmann, Jose Dinneny, Erwin Grill, Scott Hayes, Robert W Heckman, Po-Kai Hsu, Thomas Juenger, Paloma Mas, Teun Munnik, Hilde Nelissen, Lawren Sack, Julian Schroeder, Christa Testerink, Stephen Tyerman, Taishi Umezawa, Philip Anthony Wigge

(2023) - The Plant Cell

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2146. Improving crop yield potential: Underlying biological processes and future prospects

Alexandra J Gibbs, Céline Masclaux-Daubresse, Guenter Strittmatter, Weber APM, Samuel Taylor, Jeremy Harbinson, Xinyou Yin, Stephen Long, Matthew Paul, Peter Westhoff, Francesco Loreto, Aldo Ceriotti, Mathias Pribil, Philippe Nacry, Lars Scharff, Poul Erik Jensen, BERTRAND MULLER, Jean-Pierre COHAN, John Foulkes, Peter Rogowsky, Philippe Debaeke, Christian Meyer, Hilde Nelissen, Dirk Inzé, René Klein Lankhorst, Martin Parry, Erik Murchie, Alexandra Baekelandt

(2023) - Food and Energy Security

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2145. ABCB-mediated shootward auxin transport feeds into the root clock.

Chen J, Hu Y, Hao P, Tsering T, Xia J, Zhang Y, Roth O, Njo MF, Sterck L, Hu Y, Zhao Y, Geelen D, Geisler M, Shani E, Beeckman T, Vanneste S

(2023) - EMBO reports

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