Publications

273. Microarray analysis of E2Fa-DPa-overexpressing plants uncovers a cross-talking genetic network between DNA replication and nitrogen assimilation

VLIEGHE, K, VUYLSTEKE, M, FLORQUIN, K, ROMBAUTS, S, MAES, S, ORMENESE, S, VAN HUMMELEN, P, VAN DE PEER, Y, INZE, D, DE VEYLDER, L

(2003) - JOURNAL OF CELL SCIENCE

DOI
272. Structural diversification and neo-functionalization during floral MADS-box gene evolution by C-terminal frameshift mutations

VANDENBUSSCHE, M, THEISSEN, G, VAN DE PEER, Y, GERATS, T

(2003) - NUCLEIC ACIDS RESEARCH

DOI
271. Genomewide structural annotation and evolutionary analysis of the type I MADS-box genes in plants

DE BODT, S, RAES, J, FLORQUIN, K, ROMBAUTS, S, ROUZE, P, THEISSEN, G, VAN DE PEER, Y

(2003) - JOURNAL OF MOLECULAR EVOLUTION

DOI
270. Genome duplication, a trait shared by 22,000 species of ray-finned fish

TAYLOR, JS, BRAASCH, I, FRICKEY, T, MEYER, A, VAN DE PEER, Y

(2003) - GENOME RESEARCH

DOI
269. Investigating ancient duplication events in the Arabidopsis genome

Jeroen Raes, Klaas Vandepoele, Cedric Simillion, Yvan Saeys, Yves Van de Peer

(2003) - Journal of Structural and Functional Genomics

DOI
268. Investigating ancient duplication events in the Arabidopsis genome

Jeroen Raes, Klaas Vandepoele, Cedric Simillion, Yvan Saeys, Yves Van de Peer

(2003) - Genome Evolution

DOI
267. Phylogeny inference based on distance methods: theory

Yves Van de Peer

(2003) - In The Phylogenetic Handbook: a Practical Approach to DNA and Protein Phylogeny

DOI
266. 'Natural selection merely modified while redundancy created' - Susumu Ohno's idea of the evolutionary importance of gene and genome duplications

Meyer, A., Van de Peer, Y.

(2003) - Journal of Structural and Functional Genomics

DOI
265. Analysis of the evolutionary relationships of HIV-1 and SIVcpz sequences using Bayesian inference: Implications for the origin of HIV-1

PARASKEVIS, D, LEMEY, P, SALEMI, M, SUCHARD, M, VAN DE PEER, Y, VANDAMME, AM

(2003) - MOLECULAR BIOLOGY AND EVOLUTION

DOI
264. Fast feature selection using a simple estimation of distribution algorithm: a case study on splice site prediction

SAEYS, Y, DEGROEVE, S, AEYELS, D, VAN DE PEER, Y, ROUZE, P

(2003) - BIOINFORMATICS

DOI
263. Computational approaches to identify promoters and cis-regulatory elements in plant genomes

ROMBAUTS, S, FLORQUIN, K, LESCOT, M, MARCHAL, K, ROUZE, P, VAN DE PEER, Y

(2003) - PLANT PHYSIOLOGY

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262. Evidence that rice and other cereals are ancient aneuploids

VANDEPOELE, K, SIMILLION, C, VAN DE PEER, Y

(2003) - PLANT CELL

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261. Analysis of nucleotide sequences using TREECON

Yves Van de Peer

(2003) - The Phylogenetic Handbook: a Practical Approach to DNA and Protein Phylogeny

DOI
260. AFLPinSilico, simulating AFLP fingerprints

ROMBAUTS, S, VAN DE PEER, Y, ROUZE, P

(2003) - BIOINFORMATICS

DOI
259. Are all fishes ancient polyploids?

Yves Van de Peer, John S. Taylor, Axel Meyer

(2003) - Journal of Structural and Functional Genomics

DOI
258. Are all fish ancient tetraploids?

Yves Van de Peer, Taylor JS, Meyer A

(2003) - Genome Evolution: Gene and Genome Duplications and the Origin of Novel Gene Functions

DOI
257. Genome Evolution

Yves Van de Peer

(2003) - Springer Netherlands

DOI
256. Lignin: genetic engineering and impact on pulping.

Baucher M, Halpin C, Petit-Conil M, Boerjan W

(2003) -

DOI
255. An abscisic acid-sensitive checkpoint in lateral root development of Arabidopsis

De Smet, I, Signora, L, Beeckman, T, Inze, D, Foyer, CH, Zhang, HM

(2003) - Plant Journal

DOI
254. Microbial reduction and precipitation of vanadium by Shewanella oneidensis

Carpentier, W, Sandra, K, De Smet, I, Brige, A, De Smet, L, Van Beeumen, J

(2003) - Applied and Environmental Microbiology

DOI
253. Plant cell cycle transitions.

De Veylder L, Joubès J, Inzé D

(2003) -

DOI
252. A comprehensive analysis of hydrogen peroxide-induced gene expression in tobacco.

Vandenabeele S, Van Der Kelen K, Dat J, Gadjev I, Boonefaes T, Morsa S, Rottiers P, Slooten L, Van Montagu M, Zabeau M, Inze D, Van Breusegem F

(2003) -

DOI
251. Agrobacterium rhizogenes-mediated transformation of Sesbania rostrata

Willem Van de Velde, Joachim Mergeay, Marcelle Holsters, Sofie Goormachtig

(2003) - Plant Science

DOI
250. The Arabidopsis locus RCB mediates upstream regulation of mitotic gene expression.

Kristiina Himanen, Reuzeau C, Tom Beeckman, Siegbert Melzer, Grandjean O, Corben L, Dirk Inzé

(2003) - Plant Physiology

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249. Genome-Wide Characterization of the Lignification Toolbox in Arabidopsis

Jeroen Raes, Antje Rohde, Jørgen Holst Christensen, Yves Van de Peer, Wout Boerjan

(2003) - Plant Physiology

DOI
248. Genome-Wide Characterization of the Lignification Toolbox in Arabidopsis

Jeroen Raes, Antje Rohde, Jørgen Holst Christensen, Yves Van de Peer, Wout Boerjan

(2003) - Plant Physiology

DOI
247. Microarray analysis of E2Fa-DPa-overexpressing plants uncovers a cross-talking genetic network between DNA replication and nitrogen assimilation.

Vlieghe K, Vuylsteke M, Florquin K, Rombauts S, Maes S, Ormenese S, Van Hummelen P, Van de Peer Y, Inze D, De Veylder L

(2003) -

DOI
246. And then there were many: MADS goes genomic

Stefanie De Bodt, Jeroen Raes, Yves Van de Peer, Günter Theißen

(2003) - Trends in Plant Science

DOI
245. Reactive oxygen species and ethylene play a positive role in lateral root base nodulation of a semiaquatic legume.

D'Haeze W, De Rycke R, Mathis R, Goormachtig S, Pagnotta S, Verplancke C, Capoen W, Holsters M

(2003) -

DOI
244. Stacking transgenes in forest trees

Claire Halpin, Wout Boerjan

(2003) - Trends in Plant Science

DOI
243. A functional genomics approach toward the understanding of secondary metabolism in plant cells

Alain Goossens, Suvi T. Häkkinen, Into Laakso, Tuulikki Seppänen-Laakso, Stefania Biondi, Valerie De Sutter, Freya Lammertyn, Anna Maria Nuutila, Hans Söderlund, Marc Zabeau, Dirk Inzé, Kirsi-Marja Oksman-Caldentey

(2003) - Proceedings of the National Academy of Sciences

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242. Lignin Biosynthesis

Wout Boerjan, John Ralph, Marie Baucher

(2003) - Annual Review of Plant Biology

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241. Dissecting Arabidopsis lateral root development

Ilda Casimiro, Tom Beeckman, Neil Graham, Rishikesh Bhalerao, Hanma Zhang, Pedro Casero, Goran Sandberg, Malcolm J. Bennett

(2003) - Trends in Plant Science

DOI
240. Secretion of Secondary Metabolites by ATP-Binding Cassette Transporters in Plant Cell Suspension Cultures

Alain Goossens, Suvi T. Häkkinen, Into Laakso, Kirsi-Marja Oksman-Caldentey, Dirk Inzé

(2003) - Plant Physiology

DOI
239. DRL1, a homolog of the yeast TOT4/KTI12 protein, has a function in meristem activity and organ growth in plants.

Nelissen H, Clarke JH, De Block M, De Block S, Vanderhaeghen R, Zielinski RE, Dyer T, Lust S, Inzé D, Van Lijsebettens M

(2003) -

DOI
238. Novel complexes of cyclin dependent kinases and a cyclin like protein from Arabidopsis thaliana with a function unrelated to cell division

Barrôco RM, De Veylder L, Magyar Z, Engler G, Inzé D, Mironov V

(2003) - Cellular and Molecular Life Sciences

DOI
237. Changes in hydrogen peroxide homeostasis trigger an active cell death process in tobacco.

Dat JF, Pellinen R, Beeckman T, Van De Cotte B, Langebartels C, Kangasjärvi J, Inzé D, Van Breusegem F

(2003) -

DOI
236. Changes in hydrogen peroxide homeostasis trigger an active cell death process in tobacco.

Dat JF, Pellinen R, Tom Beeckman, Van De Cotte B, Langebartels C, Jaakko Sakari Kangasjärvi, Dirk Inzé, Frank Van Breusegem

(2003) - The Plant Journal

DOI
235. An abscisic acid-sensitive checkpoint in lateral root development of Arabidopsis.

Ive De Smet, Signora L, Tom Beeckman, Dirk Inzé, Christine Helen Foyer, Zhang H

(2003) - The Plant Journal

DOI
234. Gene duplication, the evolution of novel gene functions, and detecting functional divergence of duplicates in silico

Raes J, Yves Van de Peer

(2003) - Applied Bioinformatics

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233. Lignin: Genetic Engineering and Impact on Pulping

Marie Baucher, Claire Halpin, Michel Petit-Conil, Wout Boerjan

(2003) - Critical Reviews in Biochemistry and Molecular Biology

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