Staut Jasper

Staut Jasper - Predoctoral fellow @ Computational Regulomics , Programmed Cell Death , Vascular Development

6. Decoding stage-specific symbiotic programs in the Rhizophagus irregularis–tomato interaction using single-nucleus transcriptomics

Naomi Stuer, Toon Leroy, Thomas Eekhout, Annick De Keyser, Jasper Staut, Bert De Rybel, Klaas Vandepoele, Petra Van Damme, Judith Van Dingenen, Sofie Goormachtig

(2026/01) -

DOI
5. MINI-EX Version 2: Cell-Type-Specific Gene Regulatory Network Inference Using an Integrative Single-Cell Transcriptomics Approach

Jasper Staut, Nicolás Manosalva Pérez, Thomas Depuydt, Klaas Vandepoele, Svitlana Lukicheva

(2026) - Methods in Molecular Biology

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4. A single-cell transcriptome atlas of the barley root apical meristem uncovers conserved and divergent roles of HvWOX5

Anika Dolata, Jasper Staut, Edgar Demesa-Arévalo, Tianyu Lan, Gabriele Buchmann, Pavel Solansky, Lea S. Berg, Michael T. Raissig, Marja Timmermans, Maria von Korff, Rüdiger Simon, Klaas Vandepoele, Yvonne Stahl

(2026/06) -

DOI
3. A map of integrated cis-regulatory elements enhances gene-regulatory analysis in maize

Jasper Staut, Nicolás Manosalva Pérez, Andrés Matres Ferrando, Indeewari Dissanayake, Klaas Vandepoele

(2025/07) - Plant Communications

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2. A single-cell and spatial wheat root atlas with cross-species annotations delineates conserved tissue-specific marker genes and regulators

Yuji Ke, Vincent Pujol, Jasper Staut, Lotte Pollaris, Ruth Seurinck, Thomas Eekhout, Carolin Grones, Maite Saura-Sanchez, Michiel Van Bel, Marnik Vuylsteke, Andrea Ariani, Christophe Liseron-Monfils, Klaas Vandepoele, Yvan Saeys, Bert De Rybel

(2025/02) - Cell Reports

DOI
1. Benchmark of tools for in silico prediction of MHC class I and class II genotypes from NGS data

Arne Claeys, Peter Merseburger, Jasper Staut, Kathleen Marchal, Jimmy Van den Eynden

(2023/05) - BMC Genomics

DOI

Staut Jasper

Decoding stage-specific symbiotic programs in the Rhizophagus irregularis–tomato interaction using single-nucleus transcriptomics6. Decoding stage-specific symbiotic programs in the Rhizophagus irregularis–tomato interaction using single-nucleus transcriptomics

MINI-EX Version 2: Cell-Type-Specific Gene Regulatory Network Inference Using an Integrative Single-Cell Transcriptomics Approach5. MINI-EX Version 2: Cell-Type-Specific Gene Regulatory Network Inference Using an Integrative Single-Cell Transcriptomics Approach

A single-cell transcriptome atlas of the barley root apical meristem uncovers conserved and divergent roles of HvWOX54. A single-cell transcriptome atlas of the barley root apical meristem uncovers conserved and divergent roles of HvWOX5

A map of integrated cis-regulatory elements enhances gene-regulatory analysis in maize3. A map of integrated cis-regulatory elements enhances gene-regulatory analysis in maize

A single-cell and spatial wheat root atlas with cross-species annotations delineates conserved tissue-specific marker genes and regulators2. A single-cell and spatial wheat root atlas with cross-species annotations delineates conserved tissue-specific marker genes and regulators

Benchmark of tools for in silico prediction of MHC class I and class II genotypes from NGS data1. Benchmark of tools for in silico prediction of MHC class I and class II genotypes from NGS data

6. Decoding stage-specific symbiotic programs in the Rhizophagus irregularis–tomato interaction using single-nucleus transcriptomics

5. MINI-EX Version 2: Cell-Type-Specific Gene Regulatory Network Inference Using an Integrative Single-Cell Transcriptomics Approach

4. A single-cell transcriptome atlas of the barley root apical meristem uncovers conserved and divergent roles of HvWOX5

3. A map of integrated cis-regulatory elements enhances gene-regulatory analysis in maize

2. A single-cell and spatial wheat root atlas with cross-species annotations delineates conserved tissue-specific marker genes and regulators

1. Benchmark of tools for in silico prediction of MHC class I and class II genotypes from NGS data