Yvan Saeys

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Conference papers
  1. Saeys, Y., Van Landeghem, S., Van de Peer, Y. (2009) Integrated network construction using event based text mining. Proceedings of Machine Learning in Systems Biology workshop (MLSB), 105-114

  2. Van Landeghem, S., Saeys, Y., De Baets, B., Van de Peer, Y. (2009) Analyzing text in search of bio-molecular events: a high-precision machine learning framework. Proceedings of Natural Language Processing in Biomedicine (BioNLP) NAACL 2009 Workshop, 128-136

  3. Verbiest, N., Cornelis, C.,Saeys, Y. (2009) Valued constraint satisfaction problems applied to functional harmony Proceedings of IFSA-EUSFLAT 2009, 925-930

  4. Saeys, Y., Abeel, T., and Van de Peer, Y. (2008) Robust feature selection using ensemble feature selection techniques Proceedings of ECML/PKDD 2008, 313-325

  5. Bonet, I., Rodríguez, A., Grau, R., Lorenzo, M., Saeys, Y., Nowé, A. (2008) Comparing distance measures with visual methods Proceedings of the 7th Mexican International Conference on Artificial Intelligence (MICAI), 90-99

  6. Van Landeghem, S., Saeys, Y., De Baets, B., and Van de Peer, Y. (2008) Extracting protein-protein interactions from text using rich feature vectors and feature selection Proceedings of Third International Symposium on Semantic Mining in Biomedicine (SMBM 08), 77-84

  7. Saeys, Y., Abeel, T., and Van de Peer, Y. (2008) Towards robust feature selection techniques Proceedings of the 17th Dutch Belgian Machine Learning Conference (Benelearn 2008), 45-46

  8. Abeel, T., Saeys, Y., and Van de Peer, Y. (2008) ProSOM: Core promoter identification in the human genome Proceedings of the 17th Dutch Belgian Machine Learning Conference (Benelearn 2008), 77-78

  9. Van Landeghem, S., Saeys, Y., De Baets, B., and Van de Peer, Y. (2008) Benchmarking machine learning techniques for the extraction of protein-protein interactions from text Proceedings of the 17th Dutch Belgian Machine Learning Conference (Benelearn 2008), 79-80

  10. Bonet, I., Garcia, M.M., Saeys, Y., , Van de Peer, Y., and Grau, R.(2007) Predicting Human Immunodeficiency Virus (HIV) Drug Resistance using Recurrent Neural Networks Proceedings of IWINAC 2007, Lecture Notes in Computer Science 4527, 234-243.

  11. Saeys, Y., and Van de Peer, Y. (2007) Distribution based algorithms for feature weighting, ranking, and selection. Proceedings of the 16th Dutch Belgian Machine Learning Conference (Benelearn 2007).

  12. Westra, R., Tuyls, K., Saeys, Y., and Nowé, A. (2007) Knowledge Discovery and Emergent Complexity in Bioinformatics Lect. Notes in Bioinf. 4366, 1-9.

  13. Saeys, Y., and Van de Peer, Y. (2007) Enhancing coding potential prediction for short sequences using complementary sequence features and feature selection. Lect. Notes in Bioinf. 4366, 107-118.

  14. Bonet, I., Garcia, M.M., Salazar, S., Sanchex, R., Saeys, Y., Van de Peer, Y., and Grau, R.(2006) Predicting Human Immunodeficiency Virus (HIV) Drug Resistance using Recurrent Neural Networks Proceedings of the 10th International Electronic Conference on Synthetic Organic Chemistry, 2006.

  15. Bonet, I., Saeys, Y., Grau Abalo, R., Garcia, M.M., Sanchex, R. and Van de Peer, Y.(2006) Feature Extraction Using Clustering of Proteins Proceedings of CIARP 2006, Lecture Notes in Computer Science 4225, 614-623.

  16. Faes, P., Minnaert, B., Christiaens, M., Bonnet, E., Saeys, Y., Stroobandt, D. and Van de Peer, Y. (2006) A Scalable Hardware Accelerator for Comparing Protein Sequences Proceedings of the First International Conference on Scalable Information Systems. Hong Kong.

  17. Saeys, Y., and Van de Peer, Y. (2006) Enhancing coding potential prediction for short sequences using complementary sequence features and feature selection. Proceedings of the 15th Dutch Belgian Machine Learning Conference (Benelearn 2006).

  18. Saeys, Y., and Van de Peer, Y. (2006) Combining signal processing and machine learning techniques for coding potential prediction. Proceedings of the First International Workshop on Bioinforrmatics Cuba-Flanders 2006, Santa Clara, Cuba.

  19. Saeys, Y., Degroeve, S. and Van de Peer, Y. (2004) Digging into acceptor splice site prediction: an iterative feature selection approach. Proceedings of ECML/PKDD 2004.

  20. Saeys, Y., Degroeve, S., Aeyels, D., Rouzé, P. and Van de Peer, Y. (2004) Selecting relevant features for gene structure prediction. Proceedings of the 13th Dutch Belgian Machine Learning Conference (Benelearn 2004), 103-109.

  21. Saeys, Y., Degroeve, S., Aeyels, D., Van de Peer, Y. and Rouzé, P. (2002) Selecting Relevant Features for Splice Site Prediction by Estimation of Distribution Algorithms. Proceedings of the 11th Dutch Belgian Machine Learning Conference (Benelearn 2002), 64-71.

  22. Saeys, Y., and Van Marck, H. (2000) A Study and Improvement of the Genetic Algorithm in the CAM-Brain Machine. Proceedings of TWLT18/CEVOLE2.