Manosalva Pérez Nicolás

Manosalva Pérez Nicolás - Predoctoral fellow
Joined the group in 2020

9. MINI‐AC: inference of plant gene regulatory networks using bulk or single‐cell accessible chromatin profiles

Nicolás Manosalva Pérez, Camilla Ferrari, Julia Engelhorn, Thomas Depuydt, Hilde Nelissen, Thomas Hartwig, Klaas Vandepoele

(2024) - The Plant Journal

DOI
8. Rhizogenic Agrobacterium protein RolB interacts with the TOPLESS repressor proteins to reprogram plant immunity and development

Lore Gryffroy, Evi Ceulemans, Nicolás Manosalva Pérez, Jhon Venegas-Molina, Ana Cristina Jaramillo-Madrid, Savio D. Rodrigues, Liesbeth De Milde, Veronique Jonckheere, Marc Van Montagu, Barbara De Coninck, Klaas Vandepoele, Petra Van Damme, Alain Goossens

(2023) - Proceedings of the National Academy of Sciences

DOI
7. MINI-AC: Inference of plant gene regulatory networks using bulk or single-cell accessible chromatin profiles

Nicolás Manosalva Pérez, Camilla Ferrari, Julia Engelhorn, Thomas Depuydt, Hilde Nelissen, Thomas Hartwig, Klaas Vandepoele

(2023) -

DOI
6. Transcription factors KANADI 1, MYB DOMAIN PROTEIN 44, and PHYTOCHROME INTERACTING FACTOR 4 regulate long intergenic noncoding RNAs expressed in Arabidopsis roots

Li Liu, Michel Heidecker, Thomas Depuydt, Nicolas Manosalva Perez, Martin Crespi, Thomas Blein, Klaas Vandepoele

(2023) - Plant Physiology

DOI
5. Prediction of Transcription Factor Regulators and Gene Regulatory Networks in Tomato Using Binding Site Information

Nicolás Manosalva Pérez, Klaas Vandepoele

(2023) - Methods in Molecular Biology

DOI
4. MINI-EX version 2: cell-type-specific gene regulatory network inference using an integrative single-cell transcriptomics approach

Jasper Staut, Nicolás Manosalva Pérez, Thomas Depuydt, Klaas Vandepoele, Svitlana Lukicheva

(2023) -

DOI
3. MINI-EX: Integrative inference of single-cell gene regulatory networks in plants

Ferrari, Camilla, Manosalva Pérez, Nicolás, Klaas Vandepoele

(2022) - Molecular Plant

DOI
2. Chromatin accessibility landscapes activated by cell-surface and intracellular immune receptors

Ding, Pingtao, Sakai, Toshiyuki, Shrestha, Ram Krishna, Manosalva Pérez, Nicolás, Guo, Wenbin, Ngou, Bruno Pok Man, He, Shengbo, Liu, Chang, Feng, Xiaoqi, Zhang, Runxuan, Klaas Vandepoele, MacLean, Dan, Jones, Jonathan D G

(2021) - JOURNAL OF EXPERIMENTAL BOTANY

DOI
1. JASPAR 2022: the 9th release of the open-access database of transcription factor binding profiles

Castro-Mondragon, Jaime A, Riudavets-Puig, Rafael, Rauluseviciute, Ieva, Berhanu Lemma, Roza, Turchi, Laura, Blanc-Mathieu, Romain, Lucas, Jeremy, Boddie, Paul, Khan, Aziz, Nicolás Manosalva Pérez, Fornes, Oriol, Leung, Tiffany Y, Aguirre, Alejandro, Hammal, Fayrouz, Schmelter, Daniel, Baranasic, Damir, Ballester, Benoit, Sandelin, Albin, Lenhard, Boris, Vandepoele, Klaas, Wasserman, Wyeth W, Parcy, François, Mathelier, Anthony

(2021) - Nucleic Acids Research

DOI