Merging Microarrays: F. Hermans and E. Tsiporkova (2006). Merging microarray cell synchronization experiments through curve alignment.

GenTχWarper: J. Criel and E. Tsiporkova (2006). Gene Time Eχpression Warper: A tool for alignment, template matching and visualization of gene expression time series. Bioinformatics. 2006 Jan 15;22(2):251-2. (Advanced Access Electronic publication: 2005 Nov 17, bioinformatics/bti787) (PubMed abstract)

BiNGO: S. Maere, K. Heymans and M. Kuiper (2005). BiNGO : a Tool for Gene Ontology analysis of Biological Networks.

SIM-plex simulator: S. Vercruysse and M. Kuiper (2005). Simulating genetic networks made easy: network construction with simple building blocks. Bioinformatics. 2005 Jan 15;21(2):269-71. (Advanced Access Electronic publication: 2004 Aug 19, bioinformatics/bth478)